{
 "cells": [
  {
   "cell_type": "markdown",
   "id": "9aacc247",
   "metadata": {},
   "source": [
    "# Demo of the PHOENIX Interactive Dashboard for Stellar Spectra\n",
    "\n",
    "In this tutorial we will see how the spectra of stars vary as a function of their intrinsic properties."
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "id": "9e54e2c6",
   "metadata": {},
   "outputs": [],
   "source": [
    "from gollum.phoenix import PHOENIXGrid\n",
    "from specutils import Spectrum1D\n",
    "import pandas as pd\n",
    "import astropy.units as u\n",
    "import numpy as np"
   ]
  },
  {
   "cell_type": "markdown",
   "id": "bffcdfb9",
   "metadata": {},
   "source": [
    "### Fetch example IGRINS data"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "id": "8c6f77b7",
   "metadata": {},
   "outputs": [],
   "source": [
    "from muler.igrins import IGRINSSpectrum"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "id": "f4318987",
   "metadata": {},
   "outputs": [],
   "source": [
    "path = 'https://github.com/OttoStruve/muler_example_data/raw/main/IGRINS/01_IGRINS_test_data/'\n",
    "filename='SDCH_20201202_0059.spec_a0v.fits'\n",
    "full_path = path + filename"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "id": "36555e10",
   "metadata": {},
   "outputs": [],
   "source": [
    "spec = IGRINSSpectrum(file=full_path, order=12).normalize().remove_nans().trim_edges()\n",
    "spec.plot(color=None, ylo=0.7, yhi=1.1);"
   ]
  },
  {
   "cell_type": "markdown",
   "id": "5ed9e848",
   "metadata": {},
   "source": [
    "### Telling gollum where to find your local files\n",
    "\n",
    "The online installation guide shows [how to download and store the PHOENIX models](https://gollum-astro.readthedocs.io/en/latest/fetching_models.html).  In order to run the code below, you will need to update the `my_path` variable to the correct path on your local machine.  \n",
    "\n",
    "In this demo, the `PHOENIX/` folder is houses all of the voluminous models:"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "id": "4bdf507a",
   "metadata": {},
   "outputs": [],
   "source": [
    "grid = PHOENIXGrid(teff_range=(2500, 7000), logg_range=(2, 5), metallicity_range=(0, 0.5), wl_lo= 16200, wl_hi= 16400, path=\"C:/Users/sujay/libaries/raw/PHOENIX/\")"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "id": "6e029540",
   "metadata": {},
   "outputs": [],
   "source": [
    "grid.show_dashboard(data=spec)"
   ]
  }
 ],
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